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Reproducing Research Results: Removing a Scientific Roadblock

Posted: September 23, 2012 at 3:50 pm


The California stem cell agency faces
no easy task in trying to translate basic research findings into
something that can be used to treat patients and be sold commercially.

Even clinical trials, which only begin
long after the basic research is done and which involve more ordinary
therapeutic treatments than stem cells, fail at an astonishing rate.
Only one out of five that enter the clinical trial gauntlet
successfully finish the second stage, according to industry data
cited last spring by Pat Olson, executive director of scientific activities at the stem cell agency. And
then come even more challenges.
But at a much earlier stage of
research there is the “problem of irreproducible results,” in the
words of writer Monya Baker of the journal Nature. Baker last month reported on
moves by a firm called Science Exchange in Palo Alto, Ca., to
do something to ease the problem and speed up preclinical research.
The effort is called the Reproducibility Initiative and also involves
PLOS and figshare, an open science Internet project.
Elizabeth Iorns
Science Exchange Photo
Science Exchange is headed by Elizabeth
Iorns
, a scientist and co-founder of the firm. She wrote about  test-tube-to-clinic translation issues in a recent article in New
Scientist
that was headlined, “Is medical science built on shaky
foundations?”
Iorns said,

“One goal of scientific publication
is to share results in enough detail to allow other research teams to
reproduce them and build on them. However, many recent reports have
raised the alarm that a shocking amount of the published literature
in fields ranging from cancer biology to psychology is not
reproducible.”

Iorns cited studies in Nature that
reported that Bayer cannot “replicate about two-thirds of published
studies identifying possible drug targets” and that Amgen failed at
even a higher rate. It could not “replicate 47 of 53 highly
promising results they examined.”
The California Stem Cell Report earlier
this week asked Iorns for her thoughts on the implications for the
California stem cell agency, whose motto is "Turning stem cells into cures." Here is the full text of her response.

“First, I think it is important to
accept that there is a crisis affecting preclinical research. Recent
studies estimate that 70% of preclinical research cannot be
reproduced. This is the research that should form the foundation upon
which new discoveries can be made to enhance health, lengthen life,
and reduce the burdens of illness and disability. The
irreproducibility of preclinical research is a significant impediment
to the achievement of these goals. To solve this problem requires
immediate and concrete action. It is not enough to make
recommendations and issue guidelines to researchers. Funders must act
to ensure they fund researchers to produce high quality reproducible
research. One such way to do so, is to reward, or require,
independent validation of results. The reproducibility initiative
provides a mechanism for independent validation, allowing the
identification of high quality reproducible research. It is vital
that funders act now to address this problem, to prevent the wasted
time and money that is currently spent funding non-reproducible
research and to prevent the erosion of public trust and support for
research.”

Source:
http://californiastemcellreport.blogspot.com/feeds/posts/default?alt=rss

Recommendation and review posted by Fredricko

Chronic insomnia – Lancet 2012 review

Posted: September 23, 2012 at 3:47 pm

Insomnia is a common condition that can present independently or comorbidly with another medical or psychiatric disorder.

Treatment of chronic insomnia

Benzodiazepine-receptor agonists (BzRAs) and cognitive-behavioural therapy (CBT) are supported by the best empirical evidence.

Benzodiazepine-receptor agonists (BzRAs) are effective in the short-term management of insomnia, but evidence of long-term efficacy is scarce. Also, most hypnotic drugs are associated with potential adverse effects.

Cognitive-behavioural therapy (CBT) is an effective alternative for chronic insomnia.

CBT is more time consuming than drug management but it produces sleep improvements that are sustained over time.

However, CBT is not readily available in most clinical settings. Access and delivery can be made easier through:

- telephone consultations
- group therapy
- self-help approaches

How to succeed? Get more sleep

In this 4-minute talk, Arianna Huffington (founder of The Huffington Post) shares a small idea that can awaken much bigger ones: the power of a good night's sleep. Instead of bragging about our sleep deficits, she urges us to sleep our way to increased productivity and happiness -- and smarter decision-making.

References:

Chronic insomnia. The Lancet, Volume 379, Issue 9821, Pages 1129 - 1141, 24 March 2012.

Image source: A halo around the Moon. Wikipedia, GNU Free Documentation License.

Posted at Clinical Cases and Images. Stay updated and subscribe, follow us on Twitter and connect on Facebook.


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Recommendation and review posted by G. Smith

Chemistry in its element – artemisinin

Posted: September 23, 2012 at 3:47 pm

One of the newest drugs in the fight against malaria has its modern origins in the Vietnam war – but its true origins are thousands of years ago. Find out about artemisinin in this week’s Chemistry in its element podcast.

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Source:
http://prospect.rsc.org/blogs/cw/?feed=rss2

Recommendation and review posted by G. Smith

What’s wrong with these pictures

Posted: September 23, 2012 at 3:47 pm

Oh dear.

On Twitter this morning, various people have alerted us to a rather shocking  TV chemistry blunder. James May, of Top Gear fame, has a series on the BBC called Things you need to know, and last night’s show was about chemistry.

Within the first two minutes of the programme, it became obvious that the people doing the graphics had basically zero chemical knowledge (which is not a problem in itself), and hadn’t even bothered to have one of the chemists they obviously interviewed as part of the show to cast an eye over them (which turns out to be a much bigger problem). As May starts to try and explain what a chemical reaction is, using baking soda and vinegar as an example, this graphic pops up on the screen.

Now that one’s not too bad apart from a missing carbon in the formula for vinegar, those carbons are so tricksy to keep track of! OK, the numbers should be subscript and we have a mixture of some sub- and some not. That’s a fairly harmless error. But there’s also no arrow to suggest this is a reaction and delineate which are the reactants and which the products.

And it gets worse on the next graphic – when the formula of sodium bicarbonate is presented with the three as a superscript rather than a subscript. This is starting to get more dangerous as an error, as the meaning is much more easily confused, and it’s a bigger step away from convention. This isn’t a one-off either – later in the show, when the formula of sodium chlorate (NaClO3) is shown, it also has a superscript three.

But the daddy of the bloopers is still to come. When May describes the structure of acetic acid, things go horribly wrong – the infamous five-valent Texas carbon rears its head.

This is disappointing from the BBC, which is usually very good at science programmes. And to be fair, the overall message of the rest of the programme is OK – chemicals are all around us and aren’t all bad for us, we need them to survive. It’s just a shame that the researchers seem to have dropped the ball a little on this one. Chemistry, particularly structures and formulae, is a language in itself. Using it badly doesn’t help anyone, and it would have taken anyone with even a tiny chemical knowledge to spot these mistakes.

Phillip Broadwith

 

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Source:
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Recommendation and review posted by G. Smith

Effects of Hypertension

Posted: September 23, 2012 at 3:47 pm

Taylor James Hypertension Heart Takeda

Taylor James Hypertension Kidneys Takeda

Taylor James Hypertension Head Takeda

The global ad agency Corbett (CAHG) hired Taylor James, a New York and London based creative production studio, to execute the print campaign for Takeda’s newest hypertension drug. The series of images features a heart-shaped iceberg cracking, kidney-shaped forest being destroyed, and a hurricane in a head-shaped body of water to depict the effects of hypertension on the body. The images were created using a combination of stock photography and CG.

I really like the cracking iceberg heart out of all 3 images, it’s a nice concept, but on it’s own might read more emotionally than a disease-state—as in “cold-hearted.” The forest in the shape of an organ has been done before and I don’t think the hurricane image was executed very well. Being in pharmaceutical advertising myself, I always enjoy seeing anatomy incorporated into ad concepts…but I can’t resist critiquing them!

 

[via Moshita]

 

Source:
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Recommendation and review posted by G. Smith

Eat Your Heart Out Anatomical Cocktails

Posted: September 23, 2012 at 3:47 pm

Urine Eat Your Heart Out Drink 26th – 29th October at St Bart’s Pathology Museum in London

Urine’ cocktail in sample bottle, offered warm

Charred Eat Your Heart Out Drink 26th – 29th October at St Bart’s Pathology Museum in London

Charred Remains made from vodka and Jack Daniels with a crispy meat garnish

Suicide Eat Your Heart Out Drink 26th – 29th October at St Bart’s Pathology Museum in London

Stomach Contents contains the perfect teenage diet of chocolate pieces and skittles, the drink garnished with empty pill casings. A shot of absinthe on the top will be reflective of the green hue of stomach bile.

Stool Eat Your Heart Out Drink 26th – 29th October at St Bart’s Pathology Museum in London

Stool Sample being a creamy drink with cocoa, strawberry syrup & fudge pieces used to give the medically correct consistency of a sample.

Sanitiser Eat Your Heart Out Drink 26th – 29th October at St Bart’s Pathology Museum in London

Sanitizer cocktail is designed to cleanse your palette.

Lard Eat Your Heart Out Drink 26th – 29th October at St Bart’s Pathology Museum in London

Fat comes with a solid fatty layer on top made from melted white chocolate

 

Are you up for the challenge of trying out these disgustingly delicious cocktails at this years Eat Your Heart Out cake shop at St. Bart’s Pathology Museum hapenning October 26–28, 2012 in London?  EYHO is put on by the lovely Miss Cakehead and the cocktails are being created by James Dance of Loading, a Falmouth based internet café and games arcade.

Commenting on the collaboration with Miss Cakehead James says:

“For Eat Your Heart Out the real challenge was to try and make some drink that worked with the anatomical nature of the event, focusing on bodily fluids being too limiting. Instead I took a crime scene body outline as inspiration and tried to cover every area of the body. Of course cocktails such as the ‘Stool Sample’ and ‘Urine’ were so obvious I could not resist including them. As with the cakes each drink will be disgusting to look they will all taste amazing, horror being in peoples minds and the connections they make.”

I really wish I could be in London to attend EYHO.  Anyone in or near London, go to this!  It sounds like it’s going to be quite a fun and unique experience.

 

To find out more about the event please visit:

http://www.evilcakes.wordpress.com
http://www.facebook.com/misscakehead

 

Source:
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Recommendation and review posted by G. Smith


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