Paraschiv, S. & Paraschiv, L. S. Trends of carbon dioxide (CO2) emissions from fossil fuels combustion (coal, gas and oil) in the EU member states from 1960 to 2018. Energy Rep. 6, 237242 (2020).
Article Google Scholar
International Energy Agency (IEA). CO2 Emissions in 2022. CO2 Emiss. 2022 (2023). https://doi.org/10.1787/12ad1e1a-en.
Vom Berg, C., Carus, M., Stratmann, M. & Dammer, L. Renewable Carbon as a Guiding Principle for Sustainable Carbon Cycles. Renew. Carbon Initiat. (2022).
Wang, H., Peng, X., Zhang, H., Yang, S. & Li, H. Microorganisms-promoted biodiesel production from biomass: A review. Energy Convers. Manag. X 12, 100137 (2021).
CAS Google Scholar
Shears, J. Is there a role for synthetic biology in addressing the transition to a new lowcarbon energy system? Microb. Biotechnol. 12, 824827 (2019).
Article PubMed PubMed Central Google Scholar
Srisawat, P., Higuchi-Takeuchi, M. & Numata, K. Microbial autotrophic biorefineries: Perspectives for biopolymer production. Polym. J. 54, 11391151 (2022).
Article CAS Google Scholar
Lee, R. A. & Lavoie, J.-M. From first- to third-generation biofuels: Challenges of producing a commodity from a biomass of increasing complexity. Anim. Front 3, 611 (2013).
Article Google Scholar
Caltzontzin-Rabell, V. et al. Raw materials for a biomass-based industry. in Biofuels and Biorefining 2552 (Elsevier, 2022). https://doi.org/10.1016/B978-0-12-824116-5.00010-6.
Yang, F., Hanna, M. A. & Sun, R. Value-added uses for crude glycerola byproduct of biodiesel production. Biotechnol. Biofuels 5, 13 (2012).
Article CAS PubMed PubMed Central Google Scholar
Food and Agriculture Organization of the United Nations (FAO). Sustainable Food and Agriculture. online at https://www.fao.org/sustainability/news/detail/en/c/1274219/ (2020).
Gitz, V., Meybeck, A., Lipper, L., Young, C. & Braatz, S. Climate change and food security: Risks and responses. Food and Agriculture Organization of the United Nations (2016).
Cotton, C. A., Claassens, N. J., Benito-Vaquerizo, S. & Bar-Even, A. Renewable methanol and formate as microbial feedstocks. Curr. Opin. Biotechnol. 62, 168180 (2020).
Article CAS PubMed Google Scholar
Jiang, W. et al. Metabolic engineering strategies to enable microbial utilization of C1 feedstocks. Nat. Chem. Biol. 17, 845855 (2021).
Article CAS PubMed Google Scholar
Ewis, D. et al. Electrochemical reduction of CO2 into formate/formic acid: A review of cell design and operation. Sep. Purif. Technol. 316, 123811 (2023).
Article CAS Google Scholar
Li, P., Gong, S., Li, C. & Liu, Z. Analysis of routes for electrochemical conversion of CO2 to methanol. Clean. Energy 6, 967975 (2022).
Article Google Scholar
Lee, M. Y. et al. Current achievements and the future direction of electrochemical CO2 reduction: A short review. Crit. Rev. Environ. Sci. Technol. 50, 769815 (2020).
Article CAS Google Scholar
Izadi, P. & Harnisch, F. Microbial | electrochemical CO2 reduction: To integrate or not to integrate? Joule 6, 935940 (2022).
Article Google Scholar
Nitopi, S. et al. Progress and Perspectives of Electrochemical CO2 Reduction on Copper in Aqueous Electrolyte. Chem. Rev. 119, 76107672 (2019).
Article CAS PubMed Google Scholar
Santos Correa, S., Schultz, J., Lauersen, K. J. & Soares Rosado, A. Natural carbon fixation and advances in synthetic engineering for redesigning and creating new fixation pathways. J. Adv. Res. 47, 7592 (2023).
Article CAS PubMed Google Scholar
Bar-Even, A., Noor, E. & Milo, R. A survey of carbon fixation pathways through a quantitative lens. J. Exp. Bot. 63, 23252342 (2012).
Article CAS PubMed Google Scholar
Claassens, N. J. Reductive Glycine Pathway: A Versatile Route for One-Carbon Biotech. Trends Biotechnol. 39, 327329 (2021).
Article CAS PubMed Google Scholar
Stephens, S., Mahadevan, R. & Allen, D. G. Engineering Photosynthetic Bioprocesses for Sustainable Chemical Production: A Review. Front. Bioeng. Biotechnol. 8, 610723 (2021).
Article PubMed PubMed Central Google Scholar
Zhang, S. et al. Main components of free organic carbon generated by obligate chemoautotrophic bacteria that inhibit their CO2 fixation. iScience 25, 105553 (2022).
Article ADS CAS PubMed PubMed Central Google Scholar
Sarma, S. et al. Valorization of microalgae biomass into bioproducts promoting circular bioeconomy: a holistic approach of bioremediation and biorefinery. 3 Biotech 11, 378 (2021).
Article PubMed PubMed Central Google Scholar
Veaudor, T. et al. Recent Advances in the Photoautotrophic Metabolism of Cyanobacteria: Biotechnological Implications. Life 10, 71 (2020).
Article ADS CAS PubMed PubMed Central Google Scholar
Yoon, J. & Oh, M.-K. Strategies for Biosynthesis of C1 Gas-derived Polyhydroxyalkanoates: A review. Bioresour. Technol. 344, 126307 (2022).
Article CAS PubMed Google Scholar
Bengelsdorf, F. R. et al. Industrial Acetogenic Biocatalysts: A Comparative Metabolic and Genomic Analysis. Front. Microbiol. 7, 115 (2016).
Article Google Scholar
Bourgade, B., Minton, N. P. & Islam, M. A. Genetic and metabolic engineering challenges of C1-gas fermenting acetogenic chassis organisms. FEMS Microbiol. Rev. 45, 120 (2021).
Article Google Scholar
Liew, F. E. et al. Carbon-negative production of acetone and isopropanol by gas fermentation at industrial pilot scale. Nat. Biotechnol. 40, 335344 (2022).
Article CAS PubMed Google Scholar
Yurimoto, H., Shiraishi, K. & Sakai, Y. Physiology of Methylotrophs Living in the Phyllosphere. Microorganisms 9, 809 (2021).
Article CAS PubMed PubMed Central Google Scholar
Pea, D. A., Gasser, B., Zanghellini, J., Steiger, M. G. & Mattanovich, D. Metabolic engineering of Pichia pastoris. Metab. Eng. 50, 215 (2018).
Article PubMed Google Scholar
Zhang, W. et al. Current advance in bioconversion of methanol to chemicals. Biotechnol. Biofuels 11, 111 (2018).
Article Google Scholar
Nattermann, M. et al. Engineering a new-to-nature cascade for phosphate-dependent formate to formaldehyde conversion in vitro and in vivo. Nat. Commun. 14, 2682 (2023).
Article ADS CAS PubMed PubMed Central Google Scholar
Collas, F. et al. Engineering the biological conversion of formate into crotonate in Cupriavidus necator. bioRxiv (2023). https://doi.org/10.1101/2023.03.14.532570.
Gregory, G. J., Bennett, R. K. & Papoutsakis, E. T. Recent advances toward the bioconversion of methane and methanol in synthetic methylotrophs. Metab. Eng. 71, 99116 (2022).
Article CAS PubMed Google Scholar
Guerrero-Cruz, S. et al. Methanotrophs: Discoveries, Environmental Relevance, and a Perspective on Current and Future Applications. Front. Microbiol. 12, 128 (2021).
Article Google Scholar
Fei, Q. et al. Bioconversion of natural gas to liquid fuel: Opportunities and challenges. Biotechnol. Adv. 32, 596614 (2014).
Article CAS PubMed Google Scholar
Kalyuzhnaya, M. G. et al. Highly efficient methane biocatalysis revealed in a methanotrophic bacterium. Nat. Commun. 4, 2785 (2013).
Article ADS CAS PubMed Google Scholar
Kwon, M., Ho, A. & Yoon, S. Novel approaches and reasons to isolate methanotrophic bacteria with biotechnological potentials: recent achievements and perspectives. Appl. Microbiol. Biotechnol. 103, 18 (2019).
Article CAS PubMed Google Scholar
Bar-Even, A., Noor, E., Lewis, N. E. & Milo, R. Design and analysis of synthetic carbon fixation pathways. Proc. Natl Acad. Sci. USA. 107, 88898894 (2010).
Article ADS CAS PubMed PubMed Central Google Scholar
Liang, B., Zhao, Y. & Yang, J. Recent Advances in Developing Artificial Autotrophic Microorganism for Reinforcing CO2 Fixation. Front. Microbiol. 11, 592631 (2020).
Article PubMed PubMed Central Google Scholar
Klein, V. J., Irla, M., Gil Lpez, M., Brautaset, T. & Fernandes Brito, L. Unravelling Formaldehyde Metabolism in Bacteria: Road towards Synthetic Methylotrophy. Microorganisms 10, 220 (2022).
Article CAS PubMed PubMed Central Google Scholar
Keller, P. et al. Generation of an Escherichia coli strain growing on methanol via the ribulose monophosphate cycle. Nat. Commun. 13, 113 (2022).
Article Google Scholar
Zhan, C. et al. Reprogramming methanol utilization pathways to convert Saccharomyces cerevisiae to a synthetic methylotroph. Nat. Catal. 6, 435450 (2023).
Article ADS CAS Google Scholar
Tuyishime, P. et al. Engineering Corynebacterium glutamicum for methanol-dependent growth and glutamate production. Metab. Eng. 49, 220231 (2018).
Article CAS PubMed Google Scholar
Chen, F. Y. H., Jung, H. W., Tsuei, C. Y. & Liao, J. C. Converting Escherichia coli to a Synthetic Methylotroph Growing Solely on Methanol. Cell 182, 933946.e14 (2020).
Article CAS PubMed Google Scholar
Gassler, T. et al. The industrial yeast Pichia pastoris is converted from a heterotroph into an autotroph capable of growth on CO2. Nat. Biotechnol. 38, 210216 (2020).
Article CAS PubMed Google Scholar
Gassler, T., Baumschabl, M., Sallaberger, J., Egermeier, M. & Mattanovich, D. Adaptive laboratory evolution and reverse engineering enhances autotrophic growth in Pichia pastoris. Metab. Eng. 69, 112121 (2022).
Article CAS PubMed Google Scholar
Gleizer, S. et al. Conversion of Escherichia coli to Generate All Biomass Carbon from CO2. Cell 179, 12551263.e12 (2019).
Article CAS PubMed PubMed Central Google Scholar
Baumschabl, M. et al. Conversion of CO2 into organic acids by engineered autotrophic yeast. Proc. Natl Acad. Sci. 119, 110 (2022).
Article Google Scholar
Noor, E., Flamholz, A., Liebermeister, W., Bar-Even, A. & Milo, R. A note on the kinetics of enzyme action: A decomposition that highlights thermodynamic effects. FEBS Lett. 587, 27722777 (2013).
Article CAS PubMed Google Scholar
Flamholz, A., Noor, E., Bar-Even, A. & Milo, R. EQuilibrator - The biochemical thermodynamics calculator. Nucl. Acids Res. 40, 770775 (2012).
Article Google Scholar
Noor, E. et al. Pathway Thermodynamics Highlights Kinetic Obstacles in Central Metabolism. PLoS Comput. Biol. 10, e1003483 (2014).
Article PubMed PubMed Central Google Scholar
Read the original post:
The potential of CO2-based production cycles in biotechnology to ... - Nature.com
Recommendation and review posted by G. Smith