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Is Phage Therapy Ushering In A Post-Antibiotic Era – BioProcess Online

By Pascal Birman and Cindy Fevre, Pherecydes Pharma

The misuse of antibiotics in human and animal medicine is today responsible for numerous therapeutic impasses. The root cause of this phenomenon could be the multi-resistance of bacteria to antibiotics.

Faced with the emergence of resistant bacteria, phage therapy, which uses bacterial viruses (bacteriophages) to treat bacterial infections, is emerging as one of the most credible alternatives to antibiotics.

Many health concerns arise from the massive use of antibiotics, including the increase in nosocomial diseases and the resurgence and spread of diseases normally treated by modern medicine, such as tuberculosis.

Of all these public health issues, resistance to anti-infectious drugs caused by the overuse of antibiotics is a serious cause for concern since it places many patients in situations of therapeutic impasse. Indeed, faced with overexposure to antibiotics, bacteria have developed multi-resistance mechanisms allowing them to escape their therapeutic action. These resistances have spread rapidly by horizontal gene transfer between bacteria but also between individuals, animals, and their environment.

According to the O'Neill report published in 2016,1resistance to anti-infectious drugs could become the leading cause of death by 2050, with figures as high as 10 million victims. It is estimated that microbial resistance is already responsible for 700,000 deaths per year.

The Centers for Disease Control (CDC) and the World Health Organization (WHO) are warning of the urgent need to find treatments to fight this global threat that knows no geographic or economic boundaries. Several critical multidrug-resistant bacteria (MDR) have already been identified, including Escherichia coli, Staphylococcus aureus, Pseudomonas aeruginosa, Neisseriagonorrhoeae, Salmonella, and Acinetobacter.

Technological innovation and the commercialization of alternative solutions must now play a central role in anticipating the post-antibiotic era as described by the WHO.

De-escalation of antibiotic therapy is an immediate necessity involving the use of alternatives accessible to the public. Among the solutions considered, phage therapy is relatively close to the way antibiotics work.

However, unlike the chemical molecules of antibiotics, phage therapy involves the use of bacteriophages, naturally occurring viruses capable of attacking a defined bacterial target. Each bacteriophage recognizes a specific receptor, present on the surface of the bacterial envelope, and often known as the primary virulence factors of bacteria. Present in the entire biosphere, including the human body, bacteriophages have already demonstrated a very high level of safety and innocuousness in their use for therapeutic purposes. Furthermore, the development of medical solutions using bacteriophages is a natural process, requiring no genetic/structural modification of the viruses.

This process is actually well known to scientists since it was discovered in 1917 by the French biologist Flix D'Hrelle. Considered the inventor of phage therapy, he was the first to mention the existence of a bacteria-killing virus: the "bacteriophage." In the wake of his discovery, D'Hrelle succeeded in isolating phages active against several bacterial species. As early as 1919, he implemented a therapeutic use of bacteriophage and cured children suffering from shigellosis.2However, the discovery of penicillin in 1928 and the generalization of anti-infectious treatments, a symbol of modernity, overshadowed phage therapy for a time, particularly in Western bloc countries such as the United States, Canada, and Europe.

Once bound, bacteriophages aim to exploit the target bacteria to reproduce. There are two types of bacteriophages:

Precision phage therapy is specifically based on the use of virulent bacteriophages. Their action leads with certainty to the destruction of the targeted bacteria. Temperate bacteriophages, on the other hand, present a greater degree of uncertainty, as the activation of the lytic cycle of the prophage is not systematic. In addition, the integration of the bacteriophage genome into that of the bacterium could lead to horizontal transfer of genes, such as genes encoding antibiotic resistance, among the bacterial population.

Bacteriophages target a restricted bacterial isolate defined, among other things by the type of receptor present on the surface of the target bacteria. Their specificity prevents them from attacking organisms other than those for which they were initially selected, thus preserving the patient's microbiota.

In some cases, the natural evolution of bacteria at the origin of the appearance of resistance to bacteriophages will lead to the selection of clones that drastically modify or even permanently lose the receptors targeted by the phage. With these receptors often being responsible for the virulence of the pathogens, the selected clones have reduced aggressiveness for the patient and are better controlled by the immune system.

In response to the antibiotic efficacy crisis, the use of bacteriophages is expected to become the alternative of choice. However, this process is still at the stage of clinical experimentation, since there is no phage-based drug with a marketing authorization, even though bacteriophages are now categorized as biological treatments by the health agencies. Antibiotics, which are chemical molecules that are easier to synthesize, have indeed taken precedence for a while over their natural counterpart.

Our companys approach is based on the creation of bacteriophage libraries specific to the species S. aureus, P. aeruginosa, and E. coli. From these libraries, the company manufactures batches of bacteriophages according to the pharmaceutical qualities required by the drug agencies. These bacteriophages are ready for use in clinical studies.

When a patient is included in a study, the bacteria responsible for the infection is isolated, identified, and then all of Pherecydes phages are tested on it thanks to a diagnostic test named phagogram by analogy with the antibiogram. During this test, the bacteria identified in the patient are seeded on a nutritive medium and then the different types of phages are added. The medium is then incubated for a few hours before the results are studied: the most active phages prevent bacterial growth and will thus be identified.

Clinical batches of bacteriophages previously produced and having shown activity on the patient's strain will be administered to the infected person, most often by means of an injection directly at the site of infection.

One of the world's first phage therapy studies conducted on osteoarticular infections on prostheses caused by Staphylococcus aureus infections was recently approved by the French Drug Safety Agency (ANSM). The Phase 2 study PhagoDAIR involves a panel of 64 patients with hip or knee joint infections.

The study protocol provides for the selection of anti-Staphylococcus aureus phages active on the patient's strain according to the phagogram and then the administration of these active phages directly on the site of proliferation of the bacterial strain, via a surgical procedure.3

The primary clinical evaluation of clinical infection control is performed 12 weeks after the patients' surgery. The first results are expected in 2023 for a follow-up of patients until 2025. Depending on the results, Pherecydes Pharma could start a new Phase 3 study as early as 2024.

Biological treatments, because of their difficulty to fit into existing regulatory categories, force research stakeholders to build a new framework for an empirically proven process. In order to meet the regulatory standards of the pharmaceutical industry, phage cocktails have to fit into good manufacturing practices. The main challenge is to ensure the sustainability of quality phages, particularly in the case of convincing clinical trials. For the time being, only a few companies are entering what is still perceived as a potential "niche market."

The results of these clinical trials, as well as the governmental authorizations that could follow in case of positive results, are nowadays very much awaited by many patients in therapeutic failure who are sometimes obliged to resort to medical tourism to be treated in countries with more favorable legislation.

References & Notes

About The Authors:

Pascal Birman is chief medical officer at Pherecydes Pharma. He received his MD from the Pierre and Marie Curie University in Paris VI in 1988. Previously, he was the director of therapeutic research at Servier's International Center for Therapeutic Research in the U.S. from 1994 to 2001 and then became Servier's director of international clinical operations for Europe and Asia until 2004. Birman was also previously at Ipsen and GENFIT. He joined Pherecydes Pharma in 2021.

Cindy Fevre is chief scientific officer at Pherecydes Pharma. She completed her Ph.D. in 2008 at the Pasteur Institute of Paris, where she worked on antibiotic resistance and on the physiopathology and genetic population of Klebsiella. She then joined the University Medical Center of Utrecht in the Netherlands as a scientist for two years. In 2011, Fevre rejoined the Pasteur Institute in Paris, where she led a scientific project to understand the impact of enteropathogenic bacteria on the intestinal environment using listeria model. She joined Pherecydes Pharma in 2016.

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Healthy eating on a budget – The Star Online

When people are asked why they do not eat healthy foods, many claim that it is expensive.

However, this is untrue; healthy eating can be budget-friendly, as long as you follow some simple guidelines.

Healthy eating is important for a healthy lifestyle and disease prevention.

This has become even more pertinent as we face the continuing threat of Covid-19, which has significantly altered our lives these two years.

A healthy diet is as important as good hygiene when it comes to prevention of sickness and infections.

However, there is a misconception that healthy eating is expensive and unfeasible for the general public.

The core of the issue is not cost, but having the right knowledge and making a consistent effort.

During these times of financial uncertainties, we need to correct our perceptions about healthy eating habits and encourage everyone to eat healthily.

A mistaken belief

Why does the impression that healthy eating is expensive still persist?

One of the reasons is the belief that foods labelled or promoted as superfoods or health foods, which usually carry a higher price tag, are always healthier.

Some people also equate price with nutritional value, believing that expensive imported foods are better and healthier thats absolutely not true!

Sure, these superfoods or imported produce may be rich in nutrients, but we can also get local produce with comparable nutrient content without denting the wallet!

There are also those who believe that healthy eating means consuming tonics and supplements.

These are not only costly, but certainly not necessary for everyone.

A smart consumer recognises that branding, claims and high prices do not determine the nutritional value of a food or produce.

What we need to do is to apply smart shopping skills and nutrition knowledge when it comes to buying and consuming foods.

The following tips can guide you to eat healthy within a budget.

> Shop smart

The first step towards affordable healthy eating is smart shopping.

A smart shopper obtains reasonably-priced, healthy and nutritious foods/ingredients for the family.

> Choose where you shop

You do not have to go to a high-end supermarket to get ingredients of high quality.

Purchasing groceries at wet markets, night markets and hypermarkets can get you a better bargain, and sometimes, even fresher produce.

> Plan your purchase

Prepare a weekly/biweekly meal plan and come up with a grocery list before going to the market.

Follow the list and avoid impulse buying!

> Select fresh over processed

For example, get fresh tomatoes instead of ready-to-eat pasta sauce.

It is way healthier and cheaper to make your own sauce.

> Buy in bulk

Certain products are cheaper to buy in large quantities, especially during sales.

However, plan your consumption to avoid over-purchasing and wastage.

> Pick cheaper alternatives

Cheaper does not necessarily mean less healthy.

Perhaps, you can alternate meat in your daily meals with legumes, which are cheaper and of comparable nutritional value.

> Opt for generic brands and local products

They are generally cheaper than branded or imported products, but the quality and nutritional value are of the same level.

> Read the labels

Check the nutrition information of each packaged product you are planning to buy and compare with others to get the best nutritional value and reasonable price.

Wok it up

The next step in pocket-friendly healthy eating is to cook at home.

This is generally cheaper than eating out or ordering food delivery.

More importantly, you have control over every aspect of food preparation, thus making your meals healthier and more hygienic.

Lets take the example of a dish of spaghetti bolognese.

Heres the estimated budget when you cook this dish at home for four people:

This comes up to a total of about RM20, which works out to be about RM5 per person.

Compare this to the price of RM18-25 for one dish of spaghetti bolognese before tax at a restaurant.

And heres a home-cooking tip for you: Prepare larger portions and make use of the leftovers.

For example, leftover grilled chicken from dinner can be used to make chicken sandwiches for lunch the next day.

But be mindful to store and reheat leftovers appropriately.

One positive thing about the movement control order was that more people started cooking at home.

Practise the tips above to save on cost and cook more often.

But also remember to always apply the basic principles of healthy eating, i.e.:

Healthy eating can be affordable if you have the know-how and are willing to put in the hard work required.

Dr Roseline Yap is a nutritionist and Nutrition Society of Malaysia honorary treasurer. This article is courtesy of the Malaysian Paediatric Associations Positive Parenting programme in collaboration with expert partners. For further information, please email starhealth@thestar.com.my. The information provided is for educational and communication purposes only, and it should not be construed as personal medical advice. Information published in this article is not intended to replace, supplant or augment a consultation with a health professional regarding the readers own medical care. The Star does not give any warranty on accuracy, completeness, functionality, usefulness or other assurances as to the content appearing in this column. The Star disclaims all responsibility for any losses, damage to property or personal injury suffered directly or indirectly from reliance on such information.

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Healthy eating on a budget - The Star Online

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2021 in Ed Tech: AI, Data Analytics Were Top Priorities – Government Technology

The last 12 months were a time of experimentation for both K-12 and higher education institutions. Flush with new federal funding but straining against disruptions such as COVID-19 and rampant cyber threats, schools adapted with help from ed-tech companies, nonprofits and other industry partners to meet a growing demand for flexible online learning options, as well as to improve student performance and tackle learning loss that resulted from last year's school closures.

For school districts, colleges and universities, often this work included efforts to close the digital divide and distribute tablets and laptops; start coding boot camps and other training programs to prepare the future workforce for new technologies; and make cybersecurity investments and study programs to create a bulwark of infrastructure and skills against cyber criminals.

For ed-tech companies and industry leaders helping schools through this, much of the focus was on student data and AI-driven programs designed to assist with lesson planning, student feedback and educational content.

Along those lines, Google announced the creation of an AI tutor last month to provide students with personalized feedback on assignments, academic coaching and course advisement. It was as an expansion of Googles Student Success Services, a software suite released in 2020, which includes virtual assistant functions, analytics, enrollment algorithms and other higher ed applications.

They all are thinking about how we can make learning more personalized, aligning it to when you need it for access 24/7, and using data more effectively to engage students, Butschi said. As you think about that, it starts to tee up to why were seeing data analytics, artificial intelligence and machine learning to personalize and gauge learning starting to pop up more and more.

According to a recent report from Market Research Engine, the global market for artificial intelligence in education technology will reach $5.80 billion by 2025, with a compound annual growth rate of 45 percent.

Neil Heffernan, a computer science professor at Worcester Polytechnic Institute and lead developer of the AI-based student feedback program ASSISTments, said this projected growth is partly to do with AIs potential to identify and address areas in need of improvement and help close achievement gaps.

He said ASSISTments AI feature Quick-Comments won an $8 million grant last week from the U.S. Department of Education's Education Innovation and Research program to improve its machine-learning tutoring functions.

What we want to do is find out which human tutors are doing a good job, look at what theyre doing, and put that back into the computer so that when no humans are around, we can have the program doing that, he said. When we have the computer doing that, we can measure how they do on the next problem.

While AI is helping schools with tutoring and curricula, new data management systems are streamlining the collection and storage of student performance data to identify and address areas where improvement is needed. The aim is to make the data more readable and enable data systems to integrate with learning management systems (LMS) like Google Classroom and Canvas that have only become more commonplace in K-12 during COVID-19.

Over the past year, K-12 districts and state education officials have worked with organizations such as the analytics nonprofit Ed-Fi Alliance and adopted tools like the Apigee API platform from Google Cloud to standardize data systems and make them interoperable.

Trenton Goble, VP of K-12 Strategy at Instructure, said schools need student performance data that can "flow into a data warehouse environment with clear and easy-to-use reporting" and gauge the impact of remote learning.

As schools went back to a face-to-face environment this fall, we saw a lot of interest in assessments, he said. "Assessments only have value insofar as teachers are using the data, so being able to present data in a meaningful way is a big trend."

Goble said the adoption of Instructures Canvas LMS has witnessed a lot of significant growth during this year, as schools slowly made the transition to using LMS for lower elementary grade levels following last years first closures.

He said one of the main advantages of Canvas has been its ability to integrate new digital learning tools into the LMS, noting the emergence of new AI-driven ed-tech products marketed to educators overwhelmed with choices in an ever-growing market.

Weve always been open and extensible as a platform. Our ability to allow third-party resources to integrate into the LMS is vital. The ability to integrate is, I think, key. Its an expectation at this point, he said, as schools are becoming more sophisticated in working with new technologies. [Choosing the right tools] is the toughest element for school districts. For districts that want to be open in allowing teachers to find their own tools in the K-12 space, you want those tools to integrate into the LMS."

According to a recent report from the policy think tank Information Technology and Innovation Foundation, AR/VR technology could prove a promising addition to digital learning toolkits at schools and universities, eventually.

Ellysse Dick, a policy analyst from ITIF and author of the report, said AR/VR programs enable experiential lessons that might make up for learning loss that occurred over the past two years.

A virtual field trip isnt a full replacement for a real-life field trip, but for those students who wouldnt otherwise be able to visit places that might be a bus ride away for others, VR can give them opportunities to experience some of those things, she told Government Technology in September.

But while AR and VR tools and the gamification" of learning have garnered interest in schools, Google's Butschi reiterated that "data analytics and AI are top priorities when it comes to tracking and improving grades.

Heffernan also said this years focus on machine learning in ed tech eclipsed AR/VR, which he said "continues to be totally sexy and totally oversold." He expects this trend to continue into 2022 as ed-tech developers and researchers make improvements to AI's capabilities.

When some people think about AI, they think too much about Hollywood and computers taking over, and Im not worried about that at all because I know [todays] systems are really dumb, he said, noting that AI has already helped teachers do their jobs more effectively despite current limitations.

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David Sinclair Supplements List Deep Dive – Updated 2021

Despite being 50 years of age, David looks much younger. Given that his focus is on tackling aging and he appears to exemplify this work its natural to ask whats his secret?

David doesnt give health recommendations or endorse brands, but he does share his personal supplementation:

Davids Daily Supplement Regimen:

After touching on Davids diet & exercise routines below, well look in detail at his use of NMN, resveratrol and metformin.

Davids Diet:

Davids Exercise routine:

Davids Lifestyle Choices:

David describes resveratrol and NMN as critical for the activation of sirtuin genes. Sirtuins play a key role in functions that help us to live longer particularly DNA repair.

He describes resveratrol as the accelerator pedal for the sirtuin genes (increasing their activation), and NMN as the fuel. Without the fuel, resveratrol wont be as effective.

The reason that resveratrol wont work effectively without NMN, is that sirtuin activation requires youthful NAD levels, but by 50 years old, David says, we have about half the level of NAD we had in our 20s. NAD being a molecule that is essential to energy production in our cells.

Graph showing NAD+ decrease with age via PLOS paper

So in effect, you take resveratrol to increase activation of the sirtuin genes, and NMN to ensure the sirtuins have enough energy to work properly.

Below well dig deeper into the 3 longevity supplements David takes; NMN, Resveratrol & Metformin.

First well look at the sirtuin activator David takes; Resveratrol.

Resveratrol is a molecule thats found (in small amounts) in the skin of foods like grapes, blueberries, raspberries, mulberries, and peanuts.

If you remember the hype some years ago around red wine being healthy, part of that was due to it containing tiny amounts of resveratrol.

Unfortunately, all food sources contain tiny amounts, so we need a concentrated supplement in order to see benefits!

Resveratrol is though to act as a caloric restriction mimetic, which activates beneficial cellular pathways. Studies have pointed to benefits such as:

Whilst Davids resveratrol comes from excess product leftover from lab experiments, not all of us have this luxury! Therefore we are forced to look online.

If you pop resveratrol into an Amazon search, youll find a host of different options, many of (potentially) dubious quality.

The first thing to note is that we should be looking for trans-resveratrol, not cis-resveratrol.

From Davids studies, cis-Resveratrol did not activate the sirtuin enzyme, but trans-Resveratrol did.

Next, the purity of the trans-resveratrol is important, were looking for 98%+. David mentions this at 1:17:54 of his Ben Greenfield interview, noting that 50% purity can even give diarrhea, because theres other stuff that comes along with the molecule. He also confirms that Polygonum cuspidatum (Japanese Knotweed) is a good source for the resveratrol.

To get closer to the quality that David is likely taking, we can look at research published by an old company of his; Sirtris (who were sold to GSK for $720 million). In this paper they were doing clinical tests on a formulation of resveratrol they call SRT501. Noting that:

Due to the poor aqueous solubility exhibited by resveratrol, digestive absorption is greatly influenced by drug dissolution rate. In an effort to increase absorption across the gastro-intestinal tract and thus systemically available parent compound, there has been considerable interest in the pharmaceutical manipulation of resveratrol. Decreasing the particle size of such chemicals can improve their rate of dissolution and thus their absorption. Therefore, the aim of this clinical study was to investigate whether consumption of SRT501, a micronized resveratrol formulation designed by Sirtris, a GSK Company is safe and generates measurable and pharmacologically active levels of parent agent in the circulation and in the liver.

Thats a wordy quote from the paper, but in essence, they were testing a micronized resveratrol formulation against a non-micronized version. Their study found that levels of resveratrol in the blood were 3.6x greater when using the micronized formulation, and other markers they were comparing also improved.

We see this with other molecules too; where reducing particle size increases bioavailability. For example with curcumin, whose absorption can be improved through micronization (for example Theracurmin). So this makes sense.

Micronized resveratrol options include:

Note: Whichever source of trans-resveratrol you take, according to David, you will increase its bio-availability if you take it with a fat source.

David takes it on an empty stomach in the morning, so mixes it with a bit of yogurt. However it should also be possible to take it with a meal containing fat.

David mentions in his interview with Rhonda Patrick a few nuances around the storage of resveratrol:

David takes his resveratrol in the morning, mixed into a spoon of homemade yogurt (using the Bravo starter culture), in order to increase its bio-availability.

His studies showed that without fat, resveratrol absorption was 5x lower. So consumption with yogurt (or another fat source) is important. David clarified on the recent podcast with Rhonda Patrick that the NMN doesnt need to be taken with a fat source he specifically mentions taking his NMN in capsules, downed with a glass of water in the morning.

Of course you dont need to make your own yogurt, a store bought version will work adequately. However, if youre interested to make your own version expand the box below to learn more.

David has described his yogurt making process as so:

David has specifically mentioned Bravo as the brand of yogurt culture he uses, for example at 1:12:28 of his interview on the Ben Greenfield podcast. Proponents of Bravo yogurt tout it as having a very high amount of gut friendly bacteria, when compared to other similar products. Bravo seems like a fairly expensive product to me, however, once nice trick with yogurts is that you can make a new batch using a small amount from the old batch. Removing the need to use fresh starter sachets again

In terms of further details on the yogurt making process, Ive summarized some of the key points below:

This YouTube video gives a nice (but slow-paced) example of the homemade yogurt making process.

We talked above about the sirtuin activator Resveratrol, now lets talk about NMN, which helps provides the fuel for the sirtuins to work.

NMN falls into a category of supplements, along with Nicotinamide Riboside (NR), referred to as NAD boosters which have become increasingly popular.

NAD is required for every cell of our body to help facilitate energy production. As discussed above, by age 50 you have about half as much NAD as at age 20!

The intention is that by supplementing precursors we can boost the cellular level of NAD closer to youthful levels.

Theres little to no doubt in the research community that we need to restore NAD function; but the jury is still out on what the best method will be. Currently David has his eggs in the basket of NMN.

Davids NMN powder comes from excess product left over from lab experiments. This is good to know, but doesnt help us when it comes to sourcing some. Below we will look at various possible buying options.

Potential considerations when buying include:

Assuming all the above are ok, the last crucial question is:

What Ive done below is put some of the more highly reviewed options (within USA) into a table, calculated the approximate price per gram, and added links to any 3rd party analysis certificates the companies display.

The above table provides a start, but for a detailed analysis table see this post, which also includes options for UK buyers.

Price per gramThe average price per gram appears around $4-$6. For products noticeably cheaper, it would be worth exercising caution around their authenticity.

Capsulating the PowdersWith the bulk powder versions of NMN above, you could put them into capsules yourself at home, using a capsule filling machine.

This emulates the method David uses to take his NMN; in capsules swallowed with a glass of water.

Using size 00 capsules, it takes 3 capsules to capsulate 1g of NMN. Depending on how tightly you fill them you may be a marginally over or under 1g, but it wont be by much. With enough powder, most machines can fill 100 capsules per time which would be 33 days (~1 month) supply.

TestingThere are two main types of tests companies will do. The first is third party testing on the purity of their NMN. The second is contaminant testing, for things such as heavy metals. Its a positive indicator if they can provide both.

Nicotinamide Riboside is a precursor to NAD, similar to NMN. David states in his book that his lab finds:

That being said, he isnt against NR, hes just more optimistic on NMN being the better molecule for raising NAD in the long run. He notes in a blog post on NMN & NR that:

The brand leader in sales of Nicotinamide Riboside is Chromadexs Niagen (pictured above). Amongst Chromadexs scientific advisors is Charles Brenner, who first discovered NR, and showed it could extend the life of yeast cells.

Niagens recommended serving size is 300mg (1 capsule) which may be less efficient at raising NAD levels than 1g of NMN.

If we compare NR & NMN at a price per gram, theyre more similar than I expected. Niagen works out approximately $5.22/gram, and NMN is around $5-$6/gram depending on brand.

In Davids recent interview with Rhonda Patrick, he discussed details around storage, saying:

Since David explained this Ive come to learn that Nicotinamide Riboside, when it its chloride form; Nicotinamide Riboside Chloride (as sold by Niagen), is in a stabilized form. This means that it doesnt need to be kept cold to have an adequate shelf life. More on that below

Looking at the data online around stabilized NR, I found:

What I gather from that, is that NR in its chloride form is stabilized. But like most edible products, cooling it does slow down the degradation that occurs over time. However for most people, the product isnt intended to sit on the shelf for a long time, and thus it will be consumed before the degradation becomes a problem.

There has been some concern in the field that consuming NR or NMN could decrease the bodys methyl groups and lead to health problems. The dropdown section below looks in detail at that issue.

So methylation itself, which utilizes methyl groups (CH), is an essential process for a host of critical functions in the body, including regulation of gene expression and the removal of waste products.

Consuming Niacin derivatives (which includes NR and NMN) will require the body to use up methyl groups in order to later degrade and excrete them. There has been some discussion and concern that by increasing the amount of methylation the body needs to do (through supplementation of NR/NMN), we might deplete the body of methyl groups needed to carry out essential processes.

David discussed this in his podcast with Paul Saladino (see 44mins mark), acknowledging that Niacin derivates (including NR/NMN) require methylation for excretion, but asserting that at this stage the idea of methyl depletion is anecdotal, and not something that has been shown in any NR/NMN studies.

Initially (circa 2019) David mentioned taking a supplement called betaine, also known as trimethylglycine. Then he moved to taking a combination of methyl folate plus methyl B12. This was all in an abundance of caution, rather than due to any new research that backed up the risk of methyl depletion.

After taking the B12/Folate supplement for a few months, in February 2020 David got some blood tests done, and found his B12 levels were double the recommended maximum so he stopped taking it (source: Davids Facebook post). He hasnt mentioned replacing it with anything since.

As Dr Brenner points out below, monitoring homocysteine levels (via blood test) is a proxy for methylation issues.

Methyl groups are primarily derived from nutrients in the diet, including; methionine (amino acid), folate (vitamin B9), choline, betaine, riboflavin (vitamin B2), pyridoxine (vitamin B6) and cobalamin (vitamin B12). For foods rich in these, see table 1 in this research paper.

A further source to add to this discussion is the research done by Chromadex. They hold a patent on nicotinamide riboside production, and make Niagen. In a tweet thread by their chief scientific adviser Charles Brenner, he explains that Chromadex took the potential risk of NR depleting methyl groups seriously. To test this they performed a randomized double blind placebo controlled trial administering 100, 300, or 1,000mg of NR over 56 days (study link). They used homocysteine levels as a proxy for methylation disturbance, and found no change to homocysteine in any of the dosage groups, including up to 1,000mg (see this image). If there was a shortage of methyl groups, they would have expected to homocysteine levels rise. Its worth noting the study used NR, not NMN.

In summary, current evidence for this issue is lacking, and as far as I can tell, David Sinclair is no longer taking any supplements to tackle potential methyl group depletion. However, if you wanted to be super careful, Dr Charles Brenner (an NAD researcher) mentions elevated homocysteine in the blood can be a sign of lower methyl status so one could get a blood test to check that.

Metformin is actually a relatively old drug, first discussed in medical literature in 1922, and studied in humans in the 1950s. It is derived from a plant called the French Lilac. Its primary use in medicine is for the treatment of diabetes, thanks to its ability to decrease blood glucose levels in patients.

Because Metformin has been used for years, and has an established track record of safety, this makes it more attractive as a longevity drug. Molecules that are discovered today will need years of testing before they can even come close to rival the amount of data and patient years accumulated by metformin.

Its thought the longevity benefits are at least in part derived from activation of the AMPK cellular pathway. This has a host of knock-on effects (visualized below), some of which are involved in beneficial processes like mediating inflammation and increasing autophagy (cellular cleanup).

Metformin is a prescription drug, and thus needs to be acquired through a doctors prescription, at least in most countries. It isnt (yet) considered a drug that can help improve healthspan or lifespan, and so you may need to find a forward thinking doctor if you want it prescribed for general health. Typically doctors only prescribe Metformin for blood sugar control issues (type 2 diabetes).

Typically Metformin is taken daily both by diabetics, and by people using it for healthspan extension. However, on the latest interview with Joe Rogan, they discussed a 2018 paper which showed metformin inhibits mitochondrial adaptations to aerobic exercise training. David explained that this makes sense, and its exactly metformins inhibition of mitochondrial function that leads to some of the health benefits. Specifically, they cause the cell to think its in a nutrient restricted state, and it turns on pathways typically reserved for times of scarcity. The function of these pathways is hypothesized to lead to better healthspan outcomes.

When not exercising, which is most days for David, he opts to take 0.5g of metformin in the morning and 0.5g in the evening (for source, see 1:16:45 of his Ivy Lecture, which supersedes what he said in his book). Then on exercise days, he opts not to take it at all. For similar reasons he also skips resveratrol on exercise days (source: see last paragraph of section 1 Get Moving on Davids blog post).

This is viable for David who exercises vigorously in the order of 1-2x per week, but for someone training often, this might be impractical. At which point it would come down to a decision whether the benefits of metformin/resveratrol outweigh the (potential) small impact on recovery.

In a Reddit AMA (link) David was asked whether he would take Berberine if he didnt have access to Metformin. He responds by saying he would likely take Berberine.

Berberine is interesting to many people because it has similar properties to metformin, but it doesnt require a doctors prescription. In common with metformin, it has the ability to:

Berberine dosage in treating diabetes is not entirely dissimilar to Metformin. For example in this study, the patients took 500mg of Berberine 3x per day. Then in this study they took 850mg of Metformin 3x per day. We know with David he takes 500mg of Metformin 2x per day.

Both compounds can induce gastrointestinal distress, so its common to start off on lower dosages, and gradually increase to the desired amount. This gives the gut a chance to adapt, and allows the user to back off the dosage if gastrointestinal distress is reached.

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David Sinclair Supplements List Deep Dive - Updated 2021

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The Best Science and Tech Breakthroughs of 2021 – Nerdist

Scientists and engineers explored new frontiers in every technological category in 2021. Advances in everything from spaceflight to microrobotics to artificial intelligence abounded, offering a glimpse of a world in which humanity is a multiplanet species. As well as one physiologically connected to intelligent machines. Below are the best science and tech breakthroughs of 2021, in our humble opinion, which may change when we get our Neuralink brain implants.

Although SpaceX had several spectacular failures trying to fly and land its prototype Starship rocket, that just made the first successful attempt (below) all the sweeter. According to SpaceX, the company plans to use Starships to send people to the Moon and Mars. The complete Starship system, once it comes online, will be an astounding 394 feet tall.

While seeing rovers roll around on Mars can feel commonplace, mobility breakthroughs on the Red Planet are beginning to happen. Below is video of the first-ever (mini) helicopter flight on Mars, which occurred on April 19. The flight, while short, was exceptional thanks not only to the helicopters long journey to Mars in the Perseverance rover, but also the planets super-thin atmosphere.

In July of this year, Googles DeepMind subsidiary announced it had solved a grand challenge in biology known as the protein folding problem. Using its cutting-edge AI, AlphaFold, DeepMind released the structures of 350,000 proteins. And noted that the tech will eventually be able to help identify and cure diseases.

Engineers the world over have been working on ways to shrink robots. Emblematic of the efforts from this year are microflier robots that can float on the wind. While the microfliers themselves will reportedly record things like changes in climate and the spread of disease, we cant help but experience foreboding Black Mirror vibes.

As their name implies, brain organoids, or cerebral organoids, are very much like tiny human brains; a fact that makes scientists giving them eye balls in August of this year all the wilder. The eyed organoids, while somewhat disturbing, will hopefully help to cure congenital retinal disorders and even personalize drug testing. And help to raise some important issues for bioethics as well, we imagine.

Smart clothes that can sense and record all of your movements, as well as give you posture suggestions, are now here thanks to MIT. While not wholly new, MITs smart clothes are unique because they consist of simple, knitted conductive yarn, and are amenable to mass production. As well as collecting large amounts of data from their users for robot training.

Finally on the list is Neuralinks breakthrough demonstration of a monkey telepathically playing Pong. Or, in this context, MindPong. Neuralink was able to pull off the feat by plunging 1,024 ultra-thin electrodes into a Macaques brain. (Banana smoothies were essential as well.) The company says that, in the near-term, the tech could help paralyzed people surf the net and express themselves artistically. Merging with superintelligent AI is also apparently not off the table for this rapidly moving decade.

Feature image: Neuralink/Cell Stem Cell/NASA

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Letters to the editor – December 12, 2021 – Times of Malta

Japanese longevity

The feature about ikigai and Japanese longevity (in particular Okinawa, December 5) is most interesting and useful. Ikigai is essentially about maintaining a positive mental attitude, physical and mental activity and avoiding overeating.

Japan remains at the top of human longevity league while Sardinia is said to be home to the highest percentage of European centenarians. A recent British study of this Sardinian phenomenon claims these long-lived individuals live in hilltop villages, are active most of the day, do not make much use of cars, their diet is mainly vegetables and goat cheese based, and are free from chronic disputes and anger.

Japanese longevity is not just related to ikigai but also to their traditional diet of fish, vegetables, green tea and no animal meats and dairy produce. Several decades ago, US medical statistics identified that, whereas Japanese living in Japan had low rates of heart disease, breast and prostate cancer, compared to the US, Japanese residents in America acquired similar disease patterns to other Americans within two generations. This suggested the diet in Japan was an important factor in Japan residents longevity.

Two important dietary factors contributing to Japanese longevity are thought to be fish and a fermented soya product. Fish, particularly from cold waters, is rich in omega-3 fat, which has anti-inflammatory and anti-coagulant properties besides lowering blood triglycerides levels (the worst factor in cholesterol tests). Fermented soya, which the Japanese call natto, has blood clot loosening properties.

The dietary combination of fish and natto would, therefore, be expected to be just as an effective (if not superior and safer) alternative to aspirin and cholesterol-lowering pharmaceuticals (statins). In the West, if one is not eating fish on a daily basis, one can replicate this Japanese dietary pattern with pure fish oil (marine omega-3) and nattokinase capsules.

Nattokinase is natto in capsule form and, if not available locally, can be purchased online from European suppliers.

In the 1970s and 1980s, US laboratory animal studies and a combined US and Chinese university field study in China produced evidence incriminating excessive animal-derived foods as the main promoter of cancer.

The traditional Japanese diet, containing little or no animal-derived food, probably also contributes to their longevity by lowering cancer risk. Furthermore, soya beans (and all beans and lentils) contain substances which lower breast and prostate cancer risk.

ALBERT CILIA-VINCENTI former European Medicines Agency scientific delegate, Attard

In the run-up to the Christmas season, or holiday festivities, if you will, a shadow has been cast that temporarily diminished the sparkle of led lights and Christmas cheer. The European Commissioner for Equality, Helena Dalli sought to issue some sugar-coated equality guidelines which were, fortunately, withdrawn following scathing criticism from various quarters within the European Union.

This move coming from Dalli takes me to revisit one of my favourite movies, The Nightmare Before Christmas. In Tim Burtons stop-motion animated masterpiece, the grotesque but charismatic character Jack Skellington naively tries to fuse Halloween with Christmas, going so far as to send his minions to capture Father Christmas and replacing presents with Halloween versions, which shock and terrify children and parents.

After realising his folly, Jack the Pumpkin King sets things right by reversing his actions and restores Christmas to its normal state.

Dalli has, likewise, attempted to distort the meaning of Christmas and its symbolism to suit her vision of equality but retracted her steps because of the negative backlash. However, while Skellingtons motivations may have been comical and well-intentioned, those of the commissioner could be different.

I distinctly recall, a few years back, the first draft of the Equality Bill, issued when Dalli was a minister for equality in Malta, which included a rather sinister definition of pregnancy: the state of a person who has within the ovary or womb an implanted embryo, which gradually becomes developed in the latter receptacle.

After the social partners protested against this mad scientist definition of pregnancy, which, underhandedly, attempted to separate the mother from the child, the definition was later changed to a more humane woman with child. Yet, the attempt to strip the concept of a pregnancy of any human element was evident, understood and exposed.

More recently, Dalli bragged about how she deceived the electorate by disguising the true intentions of the Labour Party electoral manifesto through the use of obscure terminology. It seems to me that Dalli harbours opinions to which she is perfectly entitled but would go to any lengths to see these ideas imposed on the rest of society, even by stealth and Macchiavellian tactics.

The proposed guidelines by the European Commission also tried to dissuade the use of names like Mary because of their Christian connotations, under the guise of promoting multiculturalism. Why my mothers name, which Leonard Bernstein in the classic West Side Story describes as all the beautiful sounds of the world in a single word, should have the effect of brandishing a crucifix to a vampire on some people eludes me.

Multiculturalism should be all-embracing. If Frank Zappa chose to name his daughter Moon Unit, I love his music no less, though I still prefer the name Mary to Moon Unit.

The EU has to grapple with striking a balance between its historical and cultural roots and a rapidly changing sociocultural environment. Yet, there is no need to resort to a sledgehammer approach to accept the new by obscuring the history and traditions that unite the countries within the Union.

The branding of the Union its flag is also an affirmation of predominantly Christian culture and values, even if the Union and member states are secular. The blue background and yellow stars are a direct reference to the biblical Mary, not Moon Unit.

In time, this may be challenged by the likes of Commissioner Dalli. Who knows, in future, we may remove the 12 yellow stars that can represent the apostles, the zodiac or the 12 labours of Hercules and replace them with a deconstructed foetus as a symbol of equality!

JOSEPH FARRUGIA Attard

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Letters to the editor - December 12, 2021 - Times of Malta

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